II. Antibody Cloning, Expression, and Purification

Phase 1: Cloning of scFv antibody from gene synthesis and production of antibody scFv fusion protein
6-8 weeks $20,000

1- Description: Clone the Vh and Vk sequence from gene synthesis into the mammalian expression vector
Deliverable: Gene synthesis product

2- Expression & purification of 10 mg of antibody scFv fragment protein

• Construction of mammalian expression vector
• Transient expression and purification of the fusion protein from mammalian culture supernatant
  Note: Although scFv could be expressed in bacterial periplasm, solubility and folding is usually an issue and that formation of mixed forms is found quite often, even with a flexible GS linker between the variable domain. Secretary expression of the scFv fusion from mammalian cells in serum-free medium is therefore recommended for this project.
  3- The reconstructed scFv antibodies will be assayed by ANTAGENE using ELISA to assess binding activities.
  4- Depending on the nature of the antigen, ANTAGENE will perform appropriate functional assays to assess the scFv antibody’s therapeutic potentials.

Deliverable: 10 mg of the ScFV protein

Phase 2: Full length antibody expression
12-15 weeks $60,000
ACTIVITIES
5- Subcloning of antibody Vh and Vk variable regions gene into Antagene’s proprietary vector for full length antibody expression
6- Sequence confirmation of expression vector DNA

• Results will be delivered to Client via email
  7- Transfection of host cell line (CHO-based) with expression vector DNA
  8- Stable cell line selection and stabilization
  9- Scale-up culture
  10- Purification of supernatant from stable pools
  11- Endotoxin and DNA/RNA removal
  12- Characterization of antibody
  -Concentration by UV280
• Purity by SDS‐PAGE
• Endotoxin, DNA/RNA concentration analyses

Phase 3: 1-2 weeks $10,000

DELIVERABLES
? Project report
? Sequence confirmation of expression vector DNA
? 50mg purified full length humanized anti-human mAb antibody
? Results from Characterization of antibody

• Concentration by UV280
• Purity by SDS‐PAGE
• Endotoxin, DNA/RNA concentration analyses

III Antigen related Technology:

a ) Antigen Preparation: Recombinant Protein Expression in Bacteria

1- Cloning of the genes into expression vector (tagged with 6xHis)
Total Time: 3-4 weeks Price: US $ 2,800

Protein Expression Service combines a variety of expression systems (bacterial and balcuvirus) with a full range of purification options, providing you with the material that you require for your application. The service spans vector construction through to purification of ready to use protein and can be tailored to meet your exact requirements.
A), Construct Generation:

• Clone coding sequence into one of a wide range of expression vectors
• The expression construct will be fully sequence verified
• Preparation of plasmid construct DNA
  B), Assessment and Optimization:
• Introduce plasmid construct DNA into bacterial
• Selection of over-expressing cells
• Small scale expression and purification study assessed by SDS-PAGE and
  C), Western blot (anti-tag or specific antiserum) analysis
• Estimation of protein yield
  2-, Scale-up and Purification:
  Total Time: 1-2 weeks, Price: US $ 1,200
• Large-scale growth of over-expressing cells
• Cells are harvested and lysed Protein typically purified from cleared lysate via 　　　　　　
  purification tag
• Further purification to remove any contaminants e.g. gel filtration
• SDS-PAGE and Western blot analysis of purified protein
• Removal of purification tag and further SDS-PAGE analysis
• Determination of protein concentration
• Delivery of at least 10mg of purified protein ready for use in your application

b ) Antigen Preparation: Recombinant Protein Expression in Baculovirus

Total Cost: $6,300 + Cost of Gene Synthesis 9 weeks

1. Gene Synthesis Gene Synthesis at $0.70/b
   1 weeks
2. Clone the gene of interest into the suitable baculovirus transfer vector.
   2 weeks at $1,000
   -PCR/restriction enzyme digestion will be used to clone the gene of interest into a baculovirus transfer vector.
   -If necessary, the sub-clone vector will be confirmed using restriction enzyme digestion and DNA sequence.
   -The recombinant transfer vector will be prepared for further experimentation.
3. Generate the recombinant baculovirus for the target gene.
   3 weeks at $2,500
   -Transfect the insect cells (sf9 cells) with recombinant transfer vector and baculovirus DNA.
   -The recombinant virus will be screened by plaque assay.
   -The recombinant virus will be amplified to a 30mL high-titer stock.
4. Amplification of recombinant baculovirus for titer stock.
   2 weeks at $850
   -A 250mL high-titer virus stock will be generated from a low-titer stock of a recombinant virus.
   -Several rounds of amplification may be required in order to increase the recombinant virus titer stock.
5. Protein Expression
   1 week at $950
   -One liter of insect cell culture will be generated.
   -Cell pellet will be harvested and delivered.
6. Protein Purification
   1 week at $1,000
   -The protein will be purified using affinity column of His-tag and GST-tag recombinant proteins.
   Total 9 weeks $6,300 + Cost of Gene Synthesis

Note:
-Purification development is not included and protein yield is variable under the baculovirus vector expression system.
-We offer and provide optimization for protein expression, which is based on M.O.I. and different cell lines. Optimization is optional.
-Price may vary depending on project.
C ), Antigen Immunization Protocol
Cost: $1,000
Mouse Immunization Protocol:

Subject:

Balb/c mice

Adjuvant:

Complete Freund’s Adjuvant (CFA) initially, followed by incomplete
Freund’s Adjuvant (IFA) for all subsequent injections.

Immunogen:

Typically, proteins and conjugated peptides. Amount of immunogen used
for each immunization is 0.1 mg /per mouse /per injection.

Procedure:

The immunogen is diluted to one mL with sterile saline and combined
with one mL of the appropriate adjuvant. The antigen and adjuvant are
mixed thoroughly to form a stable emulsion which is injected
subcutaneously and provides enhanced immune response from the
sustained presence of the immunogen.

Bleeds:

Blood is collected from the tail and allowed to clot and retract at 37°C overnight. The clotted blood is then refrigerated for 24 hours before the serum is decanted and clarified by centrifugation at 2500 rpm for 20 minutes.

Schedule:

Day 1

Bleed 0.1-0.2 ml.
1st Immunize with antigen in CFA.

Day 20

2nd Immunize with antigen in IFA.

Day 40

3rd Immunize with antigen in IFA.

Day 50

Test Bleed 0.1-0.2 mL for ELISA screen(internal quality control only, not provide to client).

Day 60

4th Immunize with antigen in IFA.

Day 70

Final Total Bleed 0.2-0.5 mL from Each mouse.

This is updated by GPT:
II. Antibody Cloning, Expression, and Purification
Phase 1: Cloning of scFv Antibody and Fusion Protein Production

Duration: 6-8 weeks | Cost: $20,000

Activities:

Cloning of scFv Antibody
The variable regions (VH and VK) of the antibody are synthesized and cloned into a mammalian expression vector.

Deliverable: Gene synthesis product

Expression and Purification of scFv Fragment
    Construction of the expression vector for mammalian cells.
    Transient expression of the scFv fusion protein in mammalian cells cultured in serum-free medium.
    Purification of 10 mg of scFv protein from the culture supernatant.

Note: Although scFv can be expressed in bacterial systems, mammalian expression is preferred for better solubility and correct folding.

Antibody Binding Assay
The purified scFv antibodies will be tested by ELISA to evaluate their binding activity.

Functional Assays
Based on the nature of the antigen, additional functional assays may be conducted to assess the therapeutic potential of the scFv antibody.

Deliverable: 10 mg of purified scFv protein

Phase 2: Full-Length Antibody Expression

Duration: 12-15 weeks | Cost: $60,000

Activities:

Subcloning of VH and VK into Full-Length Antibody Vector
The scFv antibody’s VH and VK regions are subcloned into Antagene’s proprietary vector designed for full-length antibody expression.

Sequence Confirmation of Expression Vector
The vector is sequenced to confirm the correct insertion of the antibody genes.

Deliverable: Sequence confirmation report sent via email

Cell Transfection and Stable Cell Line Development
    Transfection of CHO (Chinese Hamster Ovary) cells with the full-length antibody expression vector.
    Selection and stabilization of a stable cell line capable of producing the full-length antibody.

Scale-Up and Protein Purification
    Scale-up of the stable cell culture for large-scale protein production.
    Purification of the antibody from the cell culture supernatant, followed by endotoxin and DNA/RNA removal.

Antibody Characterization
    Concentration: Measured by UV280
    Purity: Analyzed by SDS-PAGE
    Endotoxin and DNA/RNA levels: Analyzed to ensure product quality.

Deliverable:
    50 mg of purified full-length humanized anti-human mAb
    Characterization report (concentration, purity, endotoxin, DNA/RNA levels)

Phase 3: Final Report and Deliverables

Duration: 1-2 weeks | Cost: $10,000

Deliverables:

Project summary report
Confirmation of expression vector sequence
50 mg purified full-length humanized mAb
Antibody characterization results (concentration, purity, endotoxin, DNA/RNA levels)

III. Antigen-Related Technologies
A. Antigen Preparation: Recombinant Protein Expression in Bacteria

Duration: 3-4 weeks | Cost: $2,800

Activities:

Cloning and Expression
    Cloning the antigen gene into an expression vector with a 6xHis tag for purification.
    Sequencing and verifying the construct.
    Expression in bacteria and small-scale purification for SDS-PAGE and Western blot analysis.

Scale-Up and Purification
    Large-scale bacterial expression, followed by protein purification using affinity chromatography.
    Further purification (e.g., gel filtration) and removal of the His-tag.

Deliverable: At least 10 mg of purified recombinant protein

B. Antigen Preparation: Recombinant Protein Expression in Baculovirus

Duration: 9 weeks | Cost: $6,300 + Gene Synthesis

Activities:

Gene Synthesis
Gene synthesis at $0.70/bp.

Cloning into Baculovirus Transfer Vector
    PCR and restriction enzyme digestion to clone the gene into a suitable baculovirus transfer vector.
    Sequence confirmation of the recombinant vector.

Generation of Recombinant Baculovirus
    Transfect insect cells (Sf9) with the recombinant transfer vector.
    Amplification of recombinant baculovirus and high-titer stock preparation.

Protein Expression
    Large-scale expression in insect cells, followed by protein purification using affinity chromatography (His-tag/GST-tag).

Note: Protein yield and expression optimization may vary. Optional optimization services are available.

Deliverable: Purified protein suitable for your application

C. Antigen Immunization Protocol

Cost: $1,000

Mouse Immunization Protocol:

Subject: Balb/c mice
Adjuvant: Complete Freund's Adjuvant (CFA) initially, followed by Incomplete Freund's Adjuvant (IFA) for subsequent injections.
Immunogen: Typically proteins or conjugated peptides (0.1 mg per mouse per injection).

Immunization Schedule:

Day 1: Initial immunization with CFA.
Day 20: Second immunization with IFA.
Day 40: Third immunization with IFA.
Day 50: Test bleed (for internal quality control).
Day 60: Fourth immunization with IFA.
Day 70: Final bleed (0.2-0.5 mL per mouse).

We have protocol available for rabbit, chicken, goat immunization and other animals of your choice